/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012088_1895030_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 66688904 | 100.00 % | 33344452 | 100.00 % | 33344452 | 100.00 % |
| General Reads | 32936614 | 49.39 % | 16554828 | 49.65 % | 16381786 | 49.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 6 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 33752278 | 50.61 % | 16789618 | 50.35 % | 16962660 | 50.87 % |
| Bisulfite_reads C2T | 16967231 | 25.44 % | 8526050 | 25.57 % | 8441181 | 25.32 % |
| Bisulfite_reads G2A | 15969395 | 23.95 % | 8028784 | 24.08 % | 7940611 | 23.81 % |
| Concept | Value |
|---|---|
| Unique Fragments | 13163194 |
| Average Unique | 39.48 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1420284102 | 27.66 % | 721265673 | 28.09 % | 699018429 | 27.23 % |
| Base Counts Overall C | 1099781237 | 21.42 % | 562560958 | 21.91 % | 537220279 | 20.92 % |
| Base Counts Overall G | 1114345456 | 21.70 % | 543804130 | 21.18 % | 570541326 | 22.22 % |
| Base Counts Overall T | 1433320341 | 27.91 % | 706311182 | 27.51 % | 727009159 | 28.32 % |
| Base Counts Overall N | 67314472 | 1.31 % | 33580861 | 1.31 % | 33733611 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15887212 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 33344452 |
| 76 | 33344452 |
| Insert Size Histogram |
|---|
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