/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012089_1895031_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 30872822 | 100.00 % | 15436411 | 100.00 % | 15436411 | 100.00 % |
| General Reads | 10176147 | 32.96 % | 5120109 | 33.17 % | 5056038 | 32.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 8 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20696666 | 67.04 % | 10316294 | 66.83 % | 10380372 | 67.25 % |
| Bisulfite_reads C2T | 5230526 | 16.94 % | 2631005 | 17.04 % | 2599521 | 16.84 % |
| Bisulfite_reads G2A | 4945630 | 16.02 % | 2489112 | 16.12 % | 2456518 | 15.91 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4028506 |
| Average Unique | 26.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 646329354 | 27.19 % | 328032596 | 27.60 % | 318296758 | 26.78 % |
| Base Counts Overall C | 520537257 | 21.90 % | 266686134 | 22.44 % | 253851123 | 21.36 % |
| Base Counts Overall G | 528051107 | 22.21 % | 258477843 | 21.75 % | 269573264 | 22.68 % |
| Base Counts Overall T | 651132795 | 27.39 % | 319862084 | 26.91 % | 331270711 | 27.87 % |
| Base Counts Overall N | 31156781 | 1.31 % | 15544990 | 1.31 % | 15611791 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4922441 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15436411 |
| 76 | 15436411 |
| Insert Size Histogram |
|---|
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