/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012090_1895032_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27670926 | 100.00 % | 13835463 | 100.00 % | 13835463 | 100.00 % |
| General Reads | 8679421 | 31.37 % | 4365842 | 31.56 % | 4313579 | 31.18 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 10 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18991485 | 68.63 % | 9469611 | 68.44 % | 9521874 | 68.82 % |
| Bisulfite_reads C2T | 4468082 | 16.15 % | 2246753 | 16.24 % | 2221329 | 16.06 % |
| Bisulfite_reads G2A | 4211359 | 15.22 % | 2119099 | 15.32 % | 2092260 | 15.12 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3410593 |
| Average Unique | 24.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 572824010 | 26.88 % | 281674234 | 26.44 % | 291149776 | 27.33 % |
| Base Counts Overall C | 472316053 | 22.17 % | 231580508 | 21.74 % | 240735545 | 22.60 % |
| Base Counts Overall G | 481638778 | 22.61 % | 245841206 | 23.08 % | 235797572 | 22.13 % |
| Base Counts Overall T | 575957641 | 27.03 % | 292302372 | 27.44 % | 283655269 | 26.63 % |
| Base Counts Overall N | 27924820 | 1.31 % | 13932331 | 1.31 % | 13992489 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4177982 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13835463 |
| 76 | 13835463 |
| Insert Size Histogram |
|---|
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