/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012091_1895033_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23076394 | 100.00 % | 11538197 | 100.00 % | 11538197 | 100.00 % |
| General Reads | 6986687 | 30.28 % | 3514792 | 30.46 % | 3471895 | 30.09 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11 | 0.00 % | 5 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16089696 | 69.72 % | 8023400 | 69.54 % | 8066296 | 69.91 % |
| Bisulfite_reads C2T | 3601640 | 15.61 % | 1811482 | 15.70 % | 1790158 | 15.52 % |
| Bisulfite_reads G2A | 3385058 | 14.67 % | 1703315 | 14.76 % | 1681743 | 14.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2743706 |
| Average Unique | 23.78 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 486080661 | 27.36 % | 237830143 | 26.77 % | 248250518 | 27.94 % |
| Base Counts Overall C | 385851391 | 21.72 % | 188029728 | 21.16 % | 197821663 | 22.27 % |
| Base Counts Overall G | 392568002 | 22.09 % | 201780067 | 22.71 % | 190787935 | 21.47 % |
| Base Counts Overall T | 489093305 | 27.53 % | 249182200 | 28.05 % | 239911105 | 27.00 % |
| Base Counts Overall N | 23288979 | 1.31 % | 11619031 | 1.31 % | 11669948 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3360826 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11538197 |
| 76 | 11538197 |
| Insert Size Histogram |
|---|
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