/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012092_1895034_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28069782 | 100.00 % | 14034891 | 100.00 % | 14034891 | 100.00 % |
| General Reads | 9765729 | 34.79 % | 4912093 | 35.00 % | 4853636 | 34.58 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18304047 | 65.21 % | 9122795 | 65.00 % | 9181252 | 65.42 % |
| Bisulfite_reads C2T | 5043451 | 17.97 % | 2536401 | 18.07 % | 2507050 | 17.86 % |
| Bisulfite_reads G2A | 4722284 | 16.82 % | 2375695 | 16.93 % | 2346589 | 16.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3814443 |
| Average Unique | 27.18 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 587480533 | 27.18 % | 290615379 | 26.89 % | 296865154 | 27.47 % |
| Base Counts Overall C | 473543973 | 21.91 % | 234541105 | 21.70 % | 239002868 | 22.12 % |
| Base Counts Overall G | 482217520 | 22.31 % | 243827713 | 22.56 % | 238389807 | 22.06 % |
| Base Counts Overall T | 589802753 | 27.29 % | 297568079 | 27.54 % | 292234674 | 27.04 % |
| Base Counts Overall N | 28328435 | 1.31 % | 14134331 | 1.31 % | 14194104 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4692552 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14034891 |
| 76 | 14034891 |
| Insert Size Histogram |
|---|
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