/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012093_1895035_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28487480 | 100.00 % | 14243740 | 100.00 % | 14243740 | 100.00 % |
| General Reads | 8592367 | 30.16 % | 4323236 | 30.35 % | 4269131 | 29.97 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27 | 0.00 % | 13 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19895086 | 69.84 % | 9920491 | 69.65 % | 9974595 | 70.03 % |
| Bisulfite_reads C2T | 4416965 | 15.50 % | 2221905 | 15.60 % | 2195060 | 15.41 % |
| Bisulfite_reads G2A | 4175429 | 14.66 % | 2101344 | 14.75 % | 2074085 | 14.56 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3414643 |
| Average Unique | 23.97 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 593773718 | 27.07 % | 301192545 | 27.46 % | 292581173 | 26.68 % |
| Base Counts Overall C | 483955328 | 22.06 % | 249975197 | 22.79 % | 233980131 | 21.33 % |
| Base Counts Overall G | 488388954 | 22.26 % | 237340557 | 21.64 % | 251048397 | 22.89 % |
| Base Counts Overall T | 598669958 | 27.29 % | 293915744 | 26.80 % | 304754214 | 27.79 % |
| Base Counts Overall N | 28748002 | 1.31 % | 14343937 | 1.31 % | 14404065 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4168279 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14243740 |
| 76 | 14243740 |
| Insert Size Histogram |
|---|
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