/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012094_1895036_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26502184 | 100.00 % | 13251092 | 100.00 % | 13251092 | 100.00 % |
| General Reads | 9202284 | 34.72 % | 4627746 | 34.92 % | 4574538 | 34.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 79 | 0.00 % | 39 | 0.00 % | 40 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17299821 | 65.28 % | 8623307 | 65.08 % | 8676514 | 65.48 % |
| Bisulfite_reads C2T | 4750101 | 17.92 % | 2388358 | 18.02 % | 2361743 | 17.82 % |
| Bisulfite_reads G2A | 4452262 | 16.80 % | 2239427 | 16.90 % | 2212835 | 16.70 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3620389 |
| Average Unique | 27.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 548817431 | 26.89 % | 274892544 | 26.94 % | 273924887 | 26.85 % |
| Base Counts Overall C | 452725553 | 22.19 % | 228257335 | 22.37 % | 224468218 | 22.00 % |
| Base Counts Overall G | 460432365 | 22.56 % | 229528686 | 22.50 % | 230903679 | 22.63 % |
| Base Counts Overall T | 551948713 | 27.05 % | 274311448 | 26.88 % | 277637265 | 27.21 % |
| Base Counts Overall N | 26744106 | 1.31 % | 13344071 | 1.31 % | 13400035 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4435502 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13251092 |
| 76 | 13251092 |
| Insert Size Histogram |
|---|
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