/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012095_1895037_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22856594 | 100.00 % | 11428297 | 100.00 % | 11428297 | 100.00 % |
| General Reads | 8092953 | 35.41 % | 4072373 | 35.63 % | 4020580 | 35.18 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23 | 0.00 % | 10 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14763618 | 64.59 % | 7355914 | 64.37 % | 7407704 | 64.82 % |
| Bisulfite_reads C2T | 4162076 | 18.21 % | 2093594 | 18.32 % | 2068482 | 18.10 % |
| Bisulfite_reads G2A | 3930900 | 17.20 % | 1978789 | 17.31 % | 1952111 | 17.08 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3227037 |
| Average Unique | 28.24 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 478904849 | 27.21 % | 240710658 | 27.35 % | 238194191 | 27.07 % |
| Base Counts Overall C | 386486283 | 21.96 % | 198124605 | 22.51 % | 188361678 | 21.41 % |
| Base Counts Overall G | 388777675 | 22.09 % | 191141216 | 21.72 % | 197636459 | 22.46 % |
| Base Counts Overall T | 482725829 | 27.43 % | 238494072 | 27.10 % | 244231757 | 27.75 % |
| Base Counts Overall N | 23063102 | 1.31 % | 11508318 | 1.31 % | 11554784 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3923623 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11428297 |
| 76 | 11428297 |
| Insert Size Histogram |
|---|
 |