/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012096_1895038_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24947472 | 100.00 % | 12473736 | 100.00 % | 12473736 | 100.00 % |
| General Reads | 8347598 | 33.46 % | 4200687 | 33.68 % | 4146911 | 33.25 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 11 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16599852 | 66.54 % | 8273038 | 66.32 % | 8326814 | 66.75 % |
| Bisulfite_reads C2T | 4296370 | 17.22 % | 2161118 | 17.33 % | 2135252 | 17.12 % |
| Bisulfite_reads G2A | 4051250 | 16.24 % | 2039580 | 16.35 % | 2011670 | 16.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3284059 |
| Average Unique | 26.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 525489382 | 27.36 % | 258504697 | 26.91 % | 266984685 | 27.80 % |
| Base Counts Overall C | 419970240 | 21.86 % | 210058233 | 21.87 % | 209912007 | 21.85 % |
| Base Counts Overall G | 424095003 | 22.08 % | 213738731 | 22.25 % | 210356272 | 21.90 % |
| Base Counts Overall T | 526231672 | 27.39 % | 265615940 | 27.65 % | 260615732 | 27.13 % |
| Base Counts Overall N | 25169047 | 1.31 % | 12560071 | 1.31 % | 12608976 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4018666 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12473736 |
| 76 | 12473736 |
| Insert Size Histogram |
|---|
 |