/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012097_1895039_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 25553954 | 100.00 % | 12776977 | 100.00 % | 12776977 | 100.00 % |
| General Reads | 9369699 | 36.67 % | 4717289 | 36.92 % | 4652410 | 36.41 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 8 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16184239 | 63.33 % | 8059680 | 63.08 % | 8124559 | 63.59 % |
| Bisulfite_reads C2T | 4825028 | 18.88 % | 2428477 | 19.01 % | 2396551 | 18.76 % |
| Bisulfite_reads G2A | 4544687 | 17.78 % | 2288820 | 17.91 % | 2255867 | 17.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3707929 |
| Average Unique | 29.02 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 533227781 | 27.10 % | 266606362 | 27.10 % | 266621419 | 27.10 % |
| Base Counts Overall C | 432833311 | 22.00 % | 218199124 | 22.18 % | 214634187 | 21.82 % |
| Base Counts Overall G | 438841867 | 22.30 % | 219057977 | 22.27 % | 219783890 | 22.34 % |
| Base Counts Overall T | 536961000 | 27.29 % | 267095910 | 27.15 % | 269865090 | 27.43 % |
| Base Counts Overall N | 25790499 | 1.31 % | 12867856 | 1.31 % | 12922643 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4529715 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12776977 |
| 76 | 12776977 |
| Insert Size Histogram |
|---|
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