/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012098_1895040_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 31796880 | 100.00 % | 15898440 | 100.00 % | 15898440 | 100.00 % |
| General Reads | 15824045 | 49.77 % | 7952187 | 50.02 % | 7871858 | 49.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23 | 0.00 % | 13 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15972812 | 50.23 % | 7946240 | 49.98 % | 8026572 | 50.49 % |
| Bisulfite_reads C2T | 8152163 | 25.64 % | 4095911 | 25.76 % | 4056252 | 25.51 % |
| Bisulfite_reads G2A | 7671905 | 24.13 % | 3856289 | 24.26 % | 3815616 | 24.00 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6265916 |
| Average Unique | 39.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 674222540 | 27.54 % | 338776490 | 27.67 % | 335446050 | 27.40 % |
| Base Counts Overall C | 528055471 | 21.57 % | 270374743 | 22.09 % | 257680728 | 21.05 % |
| Base Counts Overall G | 533979623 | 21.81 % | 262493144 | 21.44 % | 271486479 | 22.18 % |
| Base Counts Overall T | 680005785 | 27.77 % | 336523823 | 27.49 % | 343481962 | 28.06 % |
| Base Counts Overall N | 32096341 | 1.31 % | 16011680 | 1.31 % | 16084661 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7661474 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15898440 |
| 76 | 15898440 |
| Insert Size Histogram |
|---|
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