/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012099_1895041_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 32653316 | 100.00 % | 16326658 | 100.00 % | 16326658 | 100.00 % |
| General Reads | 13571253 | 41.56 % | 6828699 | 41.83 % | 6742554 | 41.30 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 31 | 0.00 % | 21 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19082032 | 58.44 % | 9497938 | 58.17 % | 9584094 | 58.70 % |
| Bisulfite_reads C2T | 6983649 | 21.39 % | 3512667 | 21.51 % | 3470982 | 21.26 % |
| Bisulfite_reads G2A | 6587635 | 20.17 % | 3316053 | 20.31 % | 3271582 | 20.04 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5385255 |
| Average Unique | 32.98 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 684951881 | 27.24 % | 345274241 | 27.46 % | 339677640 | 27.02 % |
| Base Counts Overall C | 549215248 | 21.84 % | 278615434 | 22.16 % | 270599814 | 21.52 % |
| Base Counts Overall G | 555962779 | 22.11 % | 275392383 | 21.91 % | 280570396 | 22.32 % |
| Base Counts Overall T | 691219588 | 27.49 % | 341429198 | 27.16 % | 349790390 | 27.82 % |
| Base Counts Overall N | 32955836 | 1.31 % | 16441410 | 1.31 % | 16514426 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6577790 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 16326658 |
| 76 | 16326658 |
| Insert Size Histogram |
|---|
 |