/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012100_1895042_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27187270 | 100.00 % | 13593635 | 100.00 % | 13593635 | 100.00 % |
| General Reads | 9226664 | 33.94 % | 4642691 | 34.15 % | 4583973 | 33.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 19 | 0.00 % | 12 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17960587 | 66.06 % | 8950932 | 65.85 % | 9009655 | 66.28 % |
| Bisulfite_reads C2T | 4750800 | 17.47 % | 2390203 | 17.58 % | 2360597 | 17.37 % |
| Bisulfite_reads G2A | 4475883 | 16.46 % | 2252500 | 16.57 % | 2223383 | 16.36 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3644136 |
| Average Unique | 26.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 567686268 | 27.12 % | 288175481 | 27.53 % | 279510787 | 26.70 % |
| Base Counts Overall C | 459267010 | 21.94 % | 233599149 | 22.32 % | 225667861 | 21.56 % |
| Base Counts Overall G | 466044397 | 22.26 % | 229601550 | 21.94 % | 236442847 | 22.59 % |
| Base Counts Overall T | 572987198 | 27.37 % | 281644126 | 26.91 % | 291343072 | 27.83 % |
| Base Counts Overall N | 27434917 | 1.31 % | 13689589 | 1.31 % | 13745328 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4470355 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13593635 |
| 76 | 13593635 |
| Insert Size Histogram |
|---|
 |