/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012101_1895043_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 31824710 | 100.00 % | 15912355 | 100.00 % | 15912355 | 100.00 % |
| General Reads | 10191258 | 32.02 % | 5134207 | 32.27 % | 5057051 | 31.78 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27 | 0.00 % | 12 | 0.00 % | 15 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 21633425 | 67.98 % | 10778136 | 67.73 % | 10855289 | 68.22 % |
| Bisulfite_reads C2T | 5241689 | 16.47 % | 2639922 | 16.59 % | 2601767 | 16.35 % |
| Bisulfite_reads G2A | 4949596 | 15.55 % | 2494297 | 15.68 % | 2455299 | 15.43 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4015919 |
| Average Unique | 25.24 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 665284493 | 27.15 % | 337840288 | 27.57 % | 327444205 | 26.72 % |
| Base Counts Overall C | 537966856 | 21.95 % | 273317457 | 22.31 % | 264649399 | 21.60 % |
| Base Counts Overall G | 544912932 | 22.24 % | 269157519 | 21.97 % | 275755413 | 22.51 % |
| Base Counts Overall T | 670226266 | 27.35 % | 328913366 | 26.84 % | 341312900 | 27.86 % |
| Base Counts Overall N | 32112123 | 1.31 % | 16022705 | 1.31 % | 16089418 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4928264 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15912355 |
| 76 | 15912355 |
| Insert Size Histogram |
|---|
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