/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012102_1895044_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28883378 | 100.00 % | 14441689 | 100.00 % | 14441689 | 100.00 % |
| General Reads | 9890315 | 34.24 % | 4982625 | 34.50 % | 4907690 | 33.98 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 8 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18993045 | 65.76 % | 9459056 | 65.50 % | 9533989 | 66.02 % |
| Bisulfite_reads C2T | 5096849 | 17.65 % | 2567186 | 17.78 % | 2529663 | 17.52 % |
| Bisulfite_reads G2A | 4793484 | 16.60 % | 2415447 | 16.73 % | 2378037 | 16.47 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3901912 |
| Average Unique | 27.02 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 602284799 | 27.08 % | 306949867 | 27.60 % | 295334932 | 26.56 % |
| Base Counts Overall C | 489165068 | 21.99 % | 251318069 | 22.60 % | 237846999 | 21.39 % |
| Base Counts Overall G | 495111008 | 22.26 % | 242163033 | 21.78 % | 252947975 | 22.75 % |
| Base Counts Overall T | 608308347 | 27.35 % | 297034928 | 26.71 % | 311273419 | 27.99 % |
| Base Counts Overall N | 29150884 | 1.31 % | 14544156 | 1.31 % | 14606728 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4783819 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14441689 |
| 76 | 14441689 |
| Insert Size Histogram |
|---|
 |