/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012103_1895045_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 30913026 | 100.00 % | 15456513 | 100.00 % | 15456513 | 100.00 % |
| General Reads | 10388262 | 33.60 % | 5228879 | 33.83 % | 5159383 | 33.38 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 40 | 0.00 % | 17 | 0.00 % | 23 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20524724 | 66.40 % | 10227617 | 66.17 % | 10297107 | 66.62 % |
| Bisulfite_reads C2T | 5361115 | 17.34 % | 2697626 | 17.45 % | 2663489 | 17.23 % |
| Bisulfite_reads G2A | 5027187 | 16.26 % | 2531270 | 16.38 % | 2495917 | 16.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4078950 |
| Average Unique | 26.39 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 655630965 | 27.54 % | 325768938 | 27.37 % | 329862027 | 27.72 % |
| Base Counts Overall C | 512984407 | 21.55 % | 252313387 | 21.20 % | 260671020 | 21.90 % |
| Base Counts Overall G | 523776460 | 22.00 % | 266810016 | 22.42 % | 256966444 | 21.59 % |
| Base Counts Overall T | 656709767 | 27.59 % | 329692983 | 27.70 % | 327016784 | 27.48 % |
| Base Counts Overall N | 31201403 | 1.31 % | 15566177 | 1.31 % | 15635226 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5009141 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15456513 |
| 76 | 15456513 |
| Insert Size Histogram |
|---|
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