/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012104_1895046_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 30840382 | 100.00 % | 15420191 | 100.00 % | 15420191 | 100.00 % |
| General Reads | 10150374 | 32.91 % | 5107745 | 33.12 % | 5042629 | 32.70 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 54 | 0.00 % | 27 | 0.00 % | 27 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20689954 | 67.09 % | 10312419 | 66.88 % | 10377535 | 67.30 % |
| Bisulfite_reads C2T | 5227864 | 16.95 % | 2629870 | 17.05 % | 2597994 | 16.85 % |
| Bisulfite_reads G2A | 4922564 | 15.96 % | 2477902 | 16.07 % | 2444662 | 15.85 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4016564 |
| Average Unique | 26.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 650243803 | 27.38 % | 328582345 | 27.67 % | 321661458 | 27.09 % |
| Base Counts Overall C | 514415457 | 21.66 % | 260052672 | 21.90 % | 254362785 | 21.42 % |
| Base Counts Overall G | 522739065 | 22.01 % | 259263918 | 21.84 % | 263475147 | 22.19 % |
| Base Counts Overall T | 656191902 | 27.63 % | 323927414 | 27.28 % | 332264488 | 27.98 % |
| Base Counts Overall N | 31119187 | 1.31 % | 15528358 | 1.31 % | 15590829 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4914268 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15420191 |
| 76 | 15420191 |
| Insert Size Histogram |
|---|
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