/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012105_1895047_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27810178 | 100.00 % | 13905089 | 100.00 % | 13905089 | 100.00 % |
| General Reads | 8763428 | 31.51 % | 4414534 | 31.75 % | 4348894 | 31.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27 | 0.00 % | 13 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19046723 | 68.49 % | 9490542 | 68.25 % | 9556181 | 68.72 % |
| Bisulfite_reads C2T | 4512117 | 16.22 % | 2271864 | 16.34 % | 2240253 | 16.11 % |
| Bisulfite_reads G2A | 4251338 | 15.29 % | 2142683 | 15.41 % | 2108655 | 15.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3463401 |
| Average Unique | 24.91 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 579202848 | 27.05 % | 292795705 | 27.35 % | 286407143 | 26.75 % |
| Base Counts Overall C | 471580415 | 22.02 % | 239681787 | 22.39 % | 231898628 | 21.66 % |
| Base Counts Overall G | 477740898 | 22.31 % | 236011783 | 22.04 % | 241729115 | 22.58 % |
| Base Counts Overall T | 584793176 | 27.31 % | 288199023 | 26.92 % | 296594153 | 27.70 % |
| Base Counts Overall N | 28066369 | 1.31 % | 14003555 | 1.31 % | 14062814 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4243984 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13905089 |
| 76 | 13905089 |
| Insert Size Histogram |
|---|
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