/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012108_1895050_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 35632540 | 100.00 % | 17816270 | 100.00 % | 17816270 | 100.00 % |
| General Reads | 30654431 | 86.03 % | 15604942 | 87.59 % | 15049489 | 84.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4978103 | 13.97 % | 2211325 | 12.41 % | 2766778 | 15.53 % |
| Bisulfite_reads C2T | 15828697 | 44.42 % | 8054525 | 45.21 % | 7774172 | 43.64 % |
| Bisulfite_reads G2A | 14825740 | 41.61 % | 7550420 | 42.38 % | 7275320 | 40.84 % |
| Concept | Value |
|---|---|
| Unique Fragments | 11406098 |
| Average Unique | 64.02 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 943704890 | 34.40 % | 379824694 | 27.69 % | 563880196 | 41.10 % |
| Base Counts Overall C | 409847794 | 14.94 % | 87192186 | 6.36 % | 322655608 | 23.52 % |
| Base Counts Overall G | 428119143 | 15.60 % | 333032469 | 24.28 % | 95086674 | 6.93 % |
| Base Counts Overall T | 926169231 | 33.76 % | 553854581 | 40.37 % | 372314650 | 27.14 % |
| Base Counts Overall N | 35864522 | 1.31 % | 17948860 | 1.31 % | 17915662 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 14271566 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 17816270 |
| 76 | 17816270 |
| Insert Size Histogram |
|---|
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