/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs/EXTERNAL-K012109_1895051_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 40959230 | 100.00 % | 20479615 | 100.00 % | 20479615 | 100.00 % |
| General Reads | 33773925 | 82.46 % | 17144337 | 83.71 % | 16629588 | 81.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7185305 | 17.54 % | 3335278 | 16.29 % | 3850027 | 18.80 % |
| Bisulfite_reads C2T | 17446223 | 42.59 % | 8852043 | 43.22 % | 8594180 | 41.96 % |
| Bisulfite_reads G2A | 16327702 | 39.86 % | 8292294 | 40.49 % | 8035408 | 39.24 % |
| Concept | Value |
|---|---|
| Unique Fragments | 12762264 |
| Average Unique | 62.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1058085686 | 33.55 % | 437727816 | 27.76 % | 620357870 | 39.34 % |
| Base Counts Overall C | 490844972 | 15.56 % | 121932235 | 7.73 % | 368912737 | 23.39 % |
| Base Counts Overall G | 512103601 | 16.24 % | 379772458 | 24.08 % | 132331143 | 8.39 % |
| Base Counts Overall T | 1051594479 | 33.34 % | 616866376 | 39.12 % | 434728103 | 27.57 % |
| Base Counts Overall N | 41231972 | 1.31 % | 20631470 | 1.31 % | 20600502 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15895638 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 20479615 |
| 76 | 20479615 |
| Insert Size Histogram |
|---|
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