/EXTERNAL BLUEPRINT/K012034_K012109_29libs_29_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 853595320 | 100.00 % | 426797660 | 100.00 % | 426797660 | 100.00 % |
| General Reads | 451954589 | 52.95 % | 228401912 | 53.52 % | 223552677 | 52.38 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 516 | 0.00 % | 263 | 0.00 % | 253 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 401640215 | 47.05 % | 198395485 | 46.48 % | 203244730 | 47.62 % |
| Bisulfite_reads C2T | 233153101 | 27.31 % | 117789826 | 27.60 % | 115363275 | 27.03 % |
| Bisulfite_reads G2A | 218802004 | 25.63 % | 110612349 | 25.92 % | 108189655 | 25.35 % |
| Concept | Value |
|---|---|
| Unique Fragments | 174799710 |
| Average Unique | 40.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 19332483035 | 29.41 % | 9006673742 | 27.41 % | 10325809293 | 31.42 % |
| Base Counts Overall C | 12957520081 | 19.71 % | 5639615239 | 17.16 % | 7317904842 | 22.27 % |
| Base Counts Overall G | 13239100492 | 20.14 % | 7475931736 | 22.75 % | 5763168756 | 17.54 % |
| Base Counts Overall T | 19337075019 | 29.42 % | 10311315083 | 31.38 % | 9025759936 | 27.46 % |
| Base Counts Overall N | 860661013 | 1.31 % | 429884020 | 1.31 % | 430776993 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.24975155073670166 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 215085890 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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