/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012035_1894977_2

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SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012035_1894977_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 105625826 100.00 % 52812913 100.00 % 52812913 100.00 %
General Reads 93541537 88.56 % 47470172 89.88 % 46071365 87.24 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 54 0.00 % 27 0.00 % 27 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 12084235 11.44 % 5342714 10.12 % 6741521 12.76 %
Bisulfite_reads C2T 48275995 45.70 % 24490328 46.37 % 23785667 45.04 %
Bisulfite_reads G2A 45265596 42.85 % 22979871 43.51 % 22285725 42.20 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 35549838
Average Unique 67.31 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 2812106900 34.58 % 1110900627 27.32 % 1701206273 41.83 %
Base Counts Overall C 1175782051 14.46 % 203123480 4.99 % 972658571 23.92 %
Base Counts Overall G 1242290078 15.27 % 1002613672 24.65 % 239676406 5.89 %
Base Counts Overall T 2796022114 34.38 % 1696700233 41.72 % 1099321881 27.03 %
Base Counts Overall N 106987459 1.32 % 53256289 1.31 % 53731170 1.32 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 44033223



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K012035_1894977_2.mapq.png



Read Length

Read Length Reads
76 52812913
76 52812913



Insert Size Plot

Insert Size Histogram
EXTERNAL-K012035_1894977_2.isize.png