/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012057_1894999_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012057_1894999_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 21594798 | 100.00 % | 10797399 | 100.00 % | 10797399 | 100.00 % |
| General Reads | 17269295 | 79.97 % | 8780849 | 81.32 % | 8488446 | 78.62 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 62 | 0.00 % | 32 | 0.00 % | 30 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4325441 | 20.03 % | 2016518 | 18.68 % | 2308923 | 21.38 % |
| Bisulfite_reads C2T | 8902375 | 41.22 % | 4524630 | 41.90 % | 4377745 | 40.54 % |
| Bisulfite_reads G2A | 8366982 | 38.75 % | 4256251 | 39.42 % | 4110731 | 38.07 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6650323 |
| Average Unique | 61.59 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 556411374 | 33.46 % | 220534630 | 26.53 % | 335876744 | 40.40 % |
| Base Counts Overall C | 255366623 | 15.36 % | 55754599 | 6.71 % | 199612024 | 24.01 % |
| Base Counts Overall G | 270120920 | 16.24 % | 205813392 | 24.76 % | 64307528 | 7.73 % |
| Base Counts Overall T | 559036775 | 33.62 % | 338411587 | 40.70 % | 220625188 | 26.54 % |
| Base Counts Overall N | 21863754 | 1.31 % | 10885515 | 1.31 % | 10978239 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 8224561 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 10797399 |
| 76 | 10797399 |
Insert Size Plot
| Insert Size Histogram |
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