/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012058_1895000_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012058_1895000_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 20642100 | 100.00 % | 10321050 | 100.00 % | 10321050 | 100.00 % |
| General Reads | 13640302 | 66.08 % | 6921056 | 67.06 % | 6719246 | 65.10 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 14 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7001770 | 33.92 % | 3399980 | 32.94 % | 3601790 | 34.90 % |
| Bisulfite_reads C2T | 7027404 | 34.04 % | 3564526 | 34.54 % | 3462878 | 33.55 % |
| Bisulfite_reads G2A | 6612926 | 32.04 % | 3356544 | 32.52 % | 3256382 | 31.55 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5292773 |
| Average Unique | 51.28 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 505537296 | 31.81 % | 217555229 | 27.38 % | 287982067 | 36.24 % |
| Base Counts Overall C | 268998677 | 16.92 % | 86660633 | 10.90 % | 182338044 | 22.94 % |
| Base Counts Overall G | 285219885 | 17.94 % | 188952399 | 23.78 % | 96267486 | 12.11 % |
| Base Counts Overall T | 508775993 | 32.01 % | 291143208 | 36.63 % | 217632785 | 27.38 % |
| Base Counts Overall N | 20909849 | 1.32 % | 10409381 | 1.31 % | 10500468 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6511861 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 10321050 |
| 76 | 10321050 |
Insert Size Plot
| Insert Size Histogram |
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