/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012062_1895004_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012062_1895004_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 21052958 | 100.00 % | 10526479 | 100.00 % | 10526479 | 100.00 % |
| General Reads | 16332949 | 77.58 % | 8285432 | 78.71 % | 8047517 | 76.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 10 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4719989 | 22.42 % | 2241037 | 21.29 % | 2478952 | 23.55 % |
| Bisulfite_reads C2T | 8435236 | 40.07 % | 4277768 | 40.64 % | 4157468 | 39.50 % |
| Bisulfite_reads G2A | 7897733 | 37.51 % | 4007674 | 38.07 % | 3890059 | 36.95 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6312766 |
| Average Unique | 59.97 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 534633085 | 32.98 % | 216408500 | 26.70 % | 318224585 | 39.26 % |
| Base Counts Overall C | 256586506 | 15.83 % | 63311025 | 7.81 % | 193275481 | 23.85 % |
| Base Counts Overall G | 271922085 | 16.77 % | 199891226 | 24.66 % | 72030859 | 8.89 % |
| Base Counts Overall T | 536613577 | 33.10 % | 320315622 | 39.52 % | 216297955 | 26.69 % |
| Base Counts Overall N | 21322513 | 1.32 % | 10612510 | 1.31 % | 10710003 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 7789292 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 10526479 |
| 76 | 10526479 |
Insert Size Plot
| Insert Size Histogram |
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