/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012063_1895005_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012063_1895005_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 16037836 | 100.00 % | 8018918 | 100.00 % | 8018918 | 100.00 % |
| General Reads | 9299680 | 57.99 % | 4723937 | 58.91 % | 4575743 | 57.06 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 46 | 0.00 % | 24 | 0.00 % | 22 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6738110 | 42.01 % | 3294957 | 41.09 % | 3443153 | 42.94 % |
| Bisulfite_reads C2T | 4790126 | 29.87 % | 2432482 | 30.33 % | 2357644 | 29.40 % |
| Bisulfite_reads G2A | 4509600 | 28.12 % | 2291479 | 28.58 % | 2218121 | 27.66 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 3577831 |
| Average Unique | 44.62 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 361911462 | 29.31 % | 163507964 | 26.48 % | 198403498 | 32.13 % |
| Base Counts Overall C | 238608946 | 19.32 % | 97508000 | 15.79 % | 141100946 | 22.85 % |
| Base Counts Overall G | 251232959 | 20.34 % | 145649138 | 23.59 % | 105583821 | 17.10 % |
| Base Counts Overall T | 366912966 | 29.71 % | 202704883 | 32.83 % | 164208083 | 26.59 % |
| Base Counts Overall N | 16247039 | 1.32 % | 8086701 | 1.31 % | 8160338 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 4424109 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8018918 |
| 76 | 8018918 |
Insert Size Plot
| Insert Size Histogram |
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