/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012110_1895052_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012110_1895052_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 48873930 | 100.00 % | 24436965 | 100.00 % | 24436965 | 100.00 % |
| General Reads | 45112294 | 92.30 % | 22877183 | 93.62 % | 22235111 | 90.99 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 6 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3761624 | 7.70 % | 1559776 | 6.38 % | 2201848 | 9.01 % |
| Bisulfite_reads C2T | 23271460 | 47.62 % | 11797229 | 48.28 % | 11474231 | 46.95 % |
| Bisulfite_reads G2A | 21840846 | 44.69 % | 11079960 | 45.34 % | 10760886 | 44.04 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 17373388 |
| Average Unique | 71.09 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1319085838 | 35.05 % | 513891117 | 27.31 % | 805194721 | 42.79 % |
| Base Counts Overall C | 525333510 | 13.96 % | 78890710 | 4.19 % | 446442800 | 23.73 % |
| Base Counts Overall G | 555157055 | 14.75 % | 461017669 | 24.50 % | 94139386 | 5.00 % |
| Base Counts Overall T | 1314221031 | 34.92 % | 803205811 | 42.69 % | 511015220 | 27.16 % |
| Base Counts Overall N | 49495176 | 1.32 % | 24640998 | 1.31 % | 24854178 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 21461630 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 24436965 |
| 76 | 24436965 |
Insert Size Plot
| Insert Size Histogram |
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