/EXTERNAL BLUEPRINT/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs/EXTERNAL-K012111_1895053_2
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs LANE EXTERNAL-K012111_1895053_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 47055728 | 100.00 % | 23527864 | 100.00 % | 23527864 | 100.00 % |
| General Reads | 43407530 | 92.25 % | 22034603 | 93.65 % | 21372927 | 90.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3648188 | 7.75 % | 1493256 | 6.35 % | 2154932 | 9.16 % |
| Bisulfite_reads C2T | 22394863 | 47.59 % | 11364180 | 48.30 % | 11030683 | 46.88 % |
| Bisulfite_reads G2A | 21012677 | 44.65 % | 10670428 | 45.35 % | 10342249 | 43.96 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 16629392 |
| Average Unique | 70.68 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1281597808 | 35.37 % | 499887269 | 27.59 % | 781710539 | 43.15 % |
| Base Counts Overall C | 494721859 | 13.65 % | 62064238 | 3.43 % | 432657621 | 23.88 % |
| Base Counts Overall G | 523862257 | 14.46 % | 446959722 | 24.67 % | 76902535 | 4.24 % |
| Base Counts Overall T | 1275454733 | 35.20 % | 779016533 | 43.00 % | 496438200 | 27.40 % |
| Base Counts Overall N | 47654399 | 1.32 % | 23717766 | 1.31 % | 23936633 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 20575980 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 23527864 |
| 76 | 23527864 |
Insert Size Plot
| Insert Size Histogram |
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