/EXTERNAL BLUEPRINT/methylation/K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs
BACK
SAMPLE K012035_K012056_K012057_K012058_K012059_K012060_K012061_K012062_K012063_K012110_K012111_11_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
20983575 |
261795 |
1.25 % |
| NonRefCpG |
880919 |
814 |
0.09 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
4270776 |
14.25 % |
28425 |
4.06 % |
341350 |
30.01 % |
431 |
10.15 % |
| Intermediate (0.3-0.7) |
9937088 |
33.17 % |
124602 |
17.79 % |
411516 |
36.18 % |
941 |
22.13 % |
| Methylated (0.7-1) |
15754242 |
52.58 % |
547397 |
78.15 % |
384666 |
33.82 % |
2880 |
67.72 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.720 |
|
0.870 |
|
0.520 |
|
0.830 |
|