/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012036_1894978_2
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SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012036_1894978_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 87115020 | 100.00 % | 43557510 | 100.00 % | 43557510 | 100.00 % |
| General Reads | 74543552 | 85.57 % | 37932956 | 87.09 % | 36610596 | 84.05 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 7 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 12571454 | 14.43 % | 5624547 | 12.91 % | 6946907 | 15.95 % |
| Bisulfite_reads C2T | 38461347 | 44.15 % | 19563707 | 44.91 % | 18897640 | 43.39 % |
| Bisulfite_reads G2A | 36082219 | 41.42 % | 18369256 | 42.17 % | 17712963 | 40.67 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 28280078 |
| Average Unique | 64.93 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 2289621034 | 34.13 % | 916482580 | 27.33 % | 1373138454 | 40.94 % |
| Base Counts Overall C | 1017984183 | 15.18 % | 232230373 | 6.92 % | 785753810 | 23.43 % |
| Base Counts Overall G | 1048764605 | 15.63 % | 802288502 | 23.92 % | 246476103 | 7.35 % |
| Base Counts Overall T | 2263809462 | 33.75 % | 1359031306 | 40.52 % | 904778156 | 26.98 % |
| Base Counts Overall N | 87677256 | 1.31 % | 43895509 | 1.31 % | 43781747 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 35074840 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 43557510 |
| 76 | 43557510 |
Insert Size Plot
| Insert Size Histogram |
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