/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012065_1895007_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012065_1895007_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18962276 | 100.00 % | 9481138 | 100.00 % | 9481138 | 100.00 % |
| General Reads | 12945032 | 68.27 % | 6571098 | 69.31 % | 6373934 | 67.23 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6017242 | 31.73 % | 2910039 | 30.69 % | 3107203 | 32.77 % |
| Bisulfite_reads C2T | 6670172 | 35.18 % | 3384644 | 35.70 % | 3285528 | 34.65 % |
| Bisulfite_reads G2A | 6274862 | 33.09 % | 3186455 | 33.61 % | 3088407 | 32.57 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5010741 |
| Average Unique | 52.85 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 442976577 | 30.34 % | 195238324 | 26.74 % | 247738253 | 33.93 % |
| Base Counts Overall C | 272421661 | 18.66 % | 103764412 | 14.21 % | 168657249 | 23.10 % |
| Base Counts Overall G | 281072725 | 19.25 % | 172669113 | 23.65 % | 108403612 | 14.85 % |
| Base Counts Overall T | 444535796 | 30.45 % | 248818311 | 34.08 % | 195717485 | 26.81 % |
| Base Counts Overall N | 19088493 | 1.31 % | 9557466 | 1.31 % | 9531027 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6180317 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9481138 |
| 76 | 9481138 |
Insert Size Plot
| Insert Size Histogram |
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