/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012066_1895008_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012066_1895008_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 16021302 | 100.00 % | 8010651 | 100.00 % | 8010651 | 100.00 % |
| General Reads | 9994793 | 62.38 % | 5076194 | 63.37 % | 4918599 | 61.40 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6026504 | 37.62 % | 2934454 | 36.63 % | 3092050 | 38.60 % |
| Bisulfite_reads C2T | 5145400 | 32.12 % | 2612372 | 32.61 % | 2533028 | 31.62 % |
| Bisulfite_reads G2A | 4849398 | 30.27 % | 2463825 | 30.76 % | 2385573 | 29.78 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 3838711 |
| Average Unique | 47.92 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 369179243 | 29.93 % | 165107218 | 26.77 % | 204072025 | 33.08 % |
| Base Counts Overall C | 235238862 | 19.07 % | 92306901 | 14.96 % | 142931961 | 23.17 % |
| Base Counts Overall G | 242741584 | 19.68 % | 146466533 | 23.75 % | 96275051 | 15.61 % |
| Base Counts Overall T | 370352530 | 30.02 % | 204865050 | 33.21 % | 165487480 | 26.83 % |
| Base Counts Overall N | 16128035 | 1.31 % | 8074425 | 1.31 % | 8053610 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 4750003 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8010651 |
| 76 | 8010651 |
Insert Size Plot
| Insert Size Histogram |
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