/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012067_1895009_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012067_1895009_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18909938 | 100.00 % | 9454969 | 100.00 % | 9454969 | 100.00 % |
| General Reads | 11507571 | 60.85 % | 5837238 | 61.74 % | 5670333 | 59.97 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7402361 | 39.15 % | 3617728 | 38.26 % | 3784633 | 40.03 % |
| Bisulfite_reads C2T | 5924082 | 31.33 % | 3003983 | 31.77 % | 2920099 | 30.88 % |
| Bisulfite_reads G2A | 5583495 | 29.53 % | 2833258 | 29.97 % | 2750237 | 29.09 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4430583 |
| Average Unique | 46.86 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 414807465 | 28.49 % | 191196959 | 26.26 % | 223610506 | 30.71 % |
| Base Counts Overall C | 298910168 | 20.53 % | 132653065 | 18.22 % | 166257103 | 22.84 % |
| Base Counts Overall G | 305536503 | 20.98 % | 169226223 | 23.24 % | 136310280 | 18.72 % |
| Base Counts Overall T | 417770907 | 28.69 % | 225423982 | 30.96 % | 192346925 | 26.42 % |
| Base Counts Overall N | 19040183 | 1.31 % | 9532384 | 1.31 % | 9507799 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5472779 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9454969 |
| 76 | 9454969 |
Insert Size Plot
| Insert Size Histogram |
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