/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012068_1895010_2
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SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012068_1895010_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18336728 | 100.00 % | 9168364 | 100.00 % | 9168364 | 100.00 % |
| General Reads | 10753675 | 58.65 % | 5454399 | 59.49 % | 5299276 | 57.80 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7583049 | 41.35 % | 3713963 | 40.51 % | 3869086 | 42.20 % |
| Bisulfite_reads C2T | 5533849 | 30.18 % | 2805639 | 30.60 % | 2728210 | 29.76 % |
| Bisulfite_reads G2A | 5219830 | 28.47 % | 2648762 | 28.89 % | 2571068 | 28.04 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4155495 |
| Average Unique | 45.32 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 397495132 | 28.15 % | 188856845 | 26.75 % | 208638287 | 29.55 % |
| Base Counts Overall C | 293883160 | 20.81 % | 135147656 | 19.14 % | 158735504 | 22.48 % |
| Base Counts Overall G | 301802293 | 21.38 % | 162006492 | 22.95 % | 139795801 | 19.80 % |
| Base Counts Overall T | 400288575 | 28.35 % | 210711233 | 29.85 % | 189577342 | 26.85 % |
| Base Counts Overall N | 18458896 | 1.31 % | 9241802 | 1.31 % | 9217094 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5121036 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9168364 |
| 76 | 9168364 |
Insert Size Plot
| Insert Size Histogram |
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