/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012069_1895011_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012069_1895011_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 18225056 | 100.00 % | 9112528 | 100.00 % | 9112528 | 100.00 % |
| General Reads | 12162495 | 66.74 % | 6173302 | 67.75 % | 5989193 | 65.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 0 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6062555 | 33.26 % | 2939226 | 32.25 % | 3123329 | 34.28 % |
| Bisulfite_reads C2T | 6257311 | 34.33 % | 3174623 | 34.84 % | 3082688 | 33.83 % |
| Bisulfite_reads G2A | 5905190 | 32.40 % | 2998679 | 32.91 % | 2906511 | 31.90 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4731762 |
| Average Unique | 51.93 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 411689317 | 29.34 % | 188927172 | 26.93 % | 222762145 | 31.75 % |
| Base Counts Overall C | 275593893 | 19.64 % | 116344590 | 16.58 % | 159249303 | 22.70 % |
| Base Counts Overall G | 283286339 | 20.19 % | 162716614 | 23.19 % | 120569725 | 17.18 % |
| Base Counts Overall T | 414411057 | 29.53 % | 224489399 | 31.99 % | 189921658 | 27.07 % |
| Base Counts Overall N | 18348706 | 1.31 % | 9186881 | 1.31 % | 9161825 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5813391 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9112528 |
| 76 | 9112528 |
Insert Size Plot
| Insert Size Histogram |
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