/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012071_1895013_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012071_1895013_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 17247364 | 100.00 % | 8623682 | 100.00 % | 8623682 | 100.00 % |
| General Reads | 9983804 | 57.89 % | 5068448 | 58.77 % | 4915356 | 57.00 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7263560 | 42.11 % | 3555234 | 41.23 % | 3708326 | 43.00 % |
| Bisulfite_reads C2T | 5144245 | 29.83 % | 2610305 | 30.27 % | 2533940 | 29.38 % |
| Bisulfite_reads G2A | 4839559 | 28.06 % | 2458143 | 28.50 % | 2381416 | 27.61 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 3842347 |
| Average Unique | 44.56 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 377096985 | 28.39 % | 177313208 | 26.70 % | 199783777 | 30.09 % |
| Base Counts Overall C | 272710377 | 20.53 % | 121552562 | 18.31 % | 151157815 | 22.76 % |
| Base Counts Overall G | 281563324 | 21.20 % | 154911029 | 23.33 % | 126652295 | 19.07 % |
| Base Counts Overall T | 379309137 | 28.56 % | 201550528 | 30.35 % | 177758609 | 26.77 % |
| Base Counts Overall N | 17367205 | 1.31 % | 8696187 | 1.31 % | 8671018 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 4743974 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8623682 |
| 76 | 8623682 |
Insert Size Plot
| Insert Size Histogram |
 |