/EXTERNAL BLUEPRINT/K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs/EXTERNAL-K012113_1895055_2
BACK
SAMPLE K012036_K012064_K012065_K012066_K012067_K012068_K012069_K012070_K012071_K012112_K012113_11_lane_gembs LANE EXTERNAL-K012113_1895055_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 57439622 | 100.00 % | 28719811 | 100.00 % | 28719811 | 100.00 % |
| General Reads | 40051004 | 69.73 % | 20308897 | 70.71 % | 19742107 | 68.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 32 | 0.00 % | 14 | 0.00 % | 18 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17388586 | 30.27 % | 8410900 | 29.29 % | 8977686 | 31.26 % |
| Bisulfite_reads C2T | 20664499 | 35.98 % | 10474952 | 36.47 % | 10189547 | 35.48 % |
| Bisulfite_reads G2A | 19386537 | 33.75 % | 9833959 | 34.24 % | 9552578 | 33.26 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 15316727 |
| Average Unique | 53.33 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1340860414 | 30.32 % | 596899139 | 26.99 % | 743961275 | 33.64 % |
| Base Counts Overall C | 830276259 | 18.77 % | 323194889 | 14.61 % | 507081370 | 22.93 % |
| Base Counts Overall G | 853614011 | 19.30 % | 518860446 | 23.46 % | 334753565 | 15.14 % |
| Base Counts Overall T | 1340267943 | 30.30 % | 743517059 | 33.62 % | 596750884 | 26.98 % |
| Base Counts Overall N | 57832267 | 1.31 % | 28953914 | 1.31 % | 28878353 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 18951465 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 28719811 |
| 76 | 28719811 |
Insert Size Plot
| Insert Size Histogram |
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