/EXTERNAL BLUEPRINT/K012038_K012079_K012116_K012117_4_lane_gembs/EXTERNAL-K012079_1895021_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17580370 | 100.00 % | 8790185 | 100.00 % | 8790185 | 100.00 % |
| General Reads | 11255079 | 64.02 % | 5677726 | 64.59 % | 5577353 | 63.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7 | 0.00 % | 5 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6325284 | 35.98 % | 3112454 | 35.41 % | 3212830 | 36.55 % |
| Bisulfite_reads C2T | 5793565 | 32.95 % | 2921869 | 33.24 % | 2871696 | 32.67 % |
| Bisulfite_reads G2A | 5461521 | 31.07 % | 2755862 | 31.35 % | 2705659 | 30.78 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4325597 |
| Average Unique | 49.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 398525137 | 29.44 % | 185827252 | 27.45 % | 212697885 | 31.42 % |
| Base Counts Overall C | 268862669 | 19.86 % | 112106042 | 16.56 % | 156756627 | 23.16 % |
| Base Counts Overall G | 274867884 | 20.31 % | 159240706 | 23.53 % | 115627178 | 17.08 % |
| Base Counts Overall T | 393697764 | 29.08 % | 210776408 | 31.14 % | 182921356 | 27.03 % |
| Base Counts Overall N | 17735036 | 1.31 % | 8893837 | 1.31 % | 8841199 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5364215 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8790185 |
| 76 | 8790185 |
| Insert Size Histogram |
|---|
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