/EXTERNAL BLUEPRINT/K012038_K012079_K012116_K012117_4_lane_gembs/EXTERNAL-K012116_1895058_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 41561678 | 100.00 % | 20780839 | 100.00 % | 20780839 | 100.00 % |
| General Reads | 21639195 | 52.07 % | 10933588 | 52.61 % | 10705607 | 51.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 2 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19922480 | 47.93 % | 9847249 | 47.39 % | 10075231 | 48.48 % |
| Bisulfite_reads C2T | 11152552 | 26.83 % | 5633106 | 27.11 % | 5519446 | 26.56 % |
| Bisulfite_reads G2A | 10486646 | 25.23 % | 5300484 | 25.51 % | 5186162 | 24.96 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8359925 |
| Average Unique | 40.23 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 943737748 | 29.49 % | 441961575 | 27.62 % | 501776173 | 31.36 % |
| Base Counts Overall C | 626450919 | 19.58 % | 267690601 | 16.73 % | 358760318 | 22.42 % |
| Base Counts Overall G | 639510717 | 19.98 % | 363980536 | 22.75 % | 275530181 | 17.22 % |
| Base Counts Overall T | 948624069 | 29.64 % | 505461764 | 31.59 % | 443162305 | 27.70 % |
| Base Counts Overall N | 41925753 | 1.31 % | 21030127 | 1.31 % | 20895626 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10311334 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 20780839 |
| 76 | 20780839 |
| Insert Size Histogram |
|---|
 |