/EXTERNAL BLUEPRINT/K012038_K012079_K012116_K012117_4_lane_gembs/EXTERNAL-K012117_1895059_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 62002596 | 100.00 % | 31001298 | 100.00 % | 31001298 | 100.00 % |
| General Reads | 46346510 | 74.75 % | 23371819 | 75.39 % | 22974691 | 74.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 37 | 0.00 % | 20 | 0.00 % | 17 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15656049 | 25.25 % | 7629459 | 24.61 % | 8026590 | 25.89 % |
| Bisulfite_reads C2T | 23912731 | 38.57 % | 12055795 | 38.89 % | 11856936 | 38.25 % |
| Bisulfite_reads G2A | 22433816 | 36.18 % | 11316044 | 36.50 % | 11117772 | 35.86 % |
| Concept | Value |
|---|---|
| Unique Fragments | 17658891 |
| Average Unique | 56.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1507294926 | 31.57 % | 639955462 | 26.81 % | 867339464 | 36.33 % |
| Base Counts Overall C | 841645134 | 17.63 % | 272366110 | 11.41 % | 569279024 | 23.85 % |
| Base Counts Overall G | 865002246 | 18.12 % | 580864733 | 24.33 % | 284137513 | 11.90 % |
| Base Counts Overall T | 1497694582 | 31.37 % | 862524462 | 36.13 % | 635170120 | 26.61 % |
| Base Counts Overall N | 62563004 | 1.31 % | 31389179 | 1.31 % | 31173825 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 21843440 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 31001298 |
| 76 | 31001298 |
| Insert Size Histogram |
|---|
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