/EXTERNAL BLUEPRINT/K012033_K012040_K012041_K012042_K012043_K012044_K012045_K012046_K012047_K012106_K012107_11_lane_gembs/EXTERNAL-K012033_1894975_2
BACK
SAMPLE K012033_K012040_K012041_K012042_K012043_K012044_K012045_K012046_K012047_K012106_K012107_11_lane_gembs LANE EXTERNAL-K012033_1894975_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 100331138 | 100.00 % | 50165569 | 100.00 % | 50165569 | 100.00 % |
| General Reads | 92442102 | 92.14 % | 46573184 | 92.84 % | 45868918 | 91.44 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 19 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7889008 | 7.86 % | 3592366 | 7.16 % | 4296642 | 8.56 % |
| Bisulfite_reads C2T | 48184659 | 48.03 % | 24268835 | 48.38 % | 23915824 | 47.67 % |
| Bisulfite_reads G2A | 44257471 | 44.11 % | 22304368 | 44.46 % | 21953103 | 43.76 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 34956796 |
| Average Unique | 69.68 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 2735452243 | 35.41 % | 1074982696 | 27.83 % | 1660469547 | 42.99 % |
| Base Counts Overall C | 1095175549 | 14.18 % | 182253348 | 4.72 % | 912922201 | 23.63 % |
| Base Counts Overall G | 1120315424 | 14.50 % | 927446310 | 24.01 % | 192869114 | 4.99 % |
| Base Counts Overall T | 2672675706 | 34.60 % | 1627497406 | 42.13 % | 1045178300 | 27.06 % |
| Base Counts Overall N | 101878704 | 1.32 % | 50569053 | 1.31 % | 51309651 | 1.33 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 43442135 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 50165569 |
| 76 | 50165569 |
Insert Size Plot
| Insert Size Histogram |
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