/EXTERNAL BLUEPRINT/K012033_K012040_K012041_K012042_K012043_K012044_K012045_K012046_K012047_K012106_K012107_11_lane_gembs/EXTERNAL-K012106_1895048_2
BACK
SAMPLE K012033_K012040_K012041_K012042_K012043_K012044_K012045_K012046_K012047_K012106_K012107_11_lane_gembs LANE EXTERNAL-K012106_1895048_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 36760702 | 100.00 % | 18380351 | 100.00 % | 18380351 | 100.00 % |
| General Reads | 31691336 | 86.21 % | 15955710 | 86.81 % | 15735626 | 85.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 3 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5069363 | 13.79 % | 2424638 | 13.19 % | 2644725 | 14.39 % |
| Bisulfite_reads C2T | 16413542 | 44.65 % | 8261035 | 44.94 % | 8152507 | 44.35 % |
| Bisulfite_reads G2A | 15277797 | 41.56 % | 7694678 | 41.86 % | 7583119 | 41.26 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 12075567 |
| Average Unique | 65.70 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 978214785 | 34.56 % | 387276411 | 27.36 % | 590938374 | 41.75 % |
| Base Counts Overall C | 419441713 | 14.82 % | 81579416 | 5.76 % | 337862297 | 23.87 % |
| Base Counts Overall G | 427221938 | 15.09 % | 341817536 | 24.15 % | 85404402 | 6.03 % |
| Base Counts Overall T | 968376632 | 34.21 % | 586087634 | 41.41 % | 382288998 | 27.01 % |
| Base Counts Overall N | 37318986 | 1.32 % | 18526030 | 1.31 % | 18792956 | 1.33 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 14973936 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 18380351 |
| 76 | 18380351 |
Insert Size Plot
| Insert Size Histogram |
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