/EXTERNAL BLUEPRINT/K012136_1_lane_gembs/EXTERNAL-K012136_1895078_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 93303666 | 100.00 % | 46651833 | 100.00 % | 46651833 | 100.00 % |
| General Reads | 87981118 | 94.30 % | 44250514 | 94.85 % | 43730604 | 93.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5322545 | 5.70 % | 2401318 | 5.15 % | 2921227 | 6.26 % |
| Bisulfite_reads C2T | 45536419 | 48.80 % | 22896833 | 49.08 % | 22639586 | 48.53 % |
| Bisulfite_reads G2A | 42444702 | 45.49 % | 21353682 | 45.77 % | 21091020 | 45.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 33185323 |
| Average Unique | 71.13 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2548566779 | 35.47 % | 974567263 | 27.13 % | 1573999516 | 43.82 % |
| Base Counts Overall C | 1014545646 | 14.12 % | 120266723 | 3.35 % | 894278923 | 24.90 % |
| Base Counts Overall G | 1048732125 | 14.60 % | 901660667 | 25.10 % | 147071458 | 4.09 % |
| Base Counts Overall T | 2478538837 | 34.50 % | 1548814337 | 43.12 % | 929724500 | 25.88 % |
| Base Counts Overall N | 93998895 | 1.31 % | 46882151 | 1.31 % | 47116744 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 40945937 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 46651833 |
| 76 | 46651833 |
| Insert Size Histogram |
|---|
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