/EXTERNAL BLUEPRINT/K012135_1_lane_gembs/EXTERNAL-K012135_1895077_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 105817444 | 100.00 % | 52908722 | 100.00 % | 52908722 | 100.00 % |
| General Reads | 101597205 | 96.01 % | 51029995 | 96.45 % | 50567210 | 95.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4220239 | 3.99 % | 1878727 | 3.55 % | 2341512 | 4.43 % |
| Bisulfite_reads C2T | 52657227 | 49.76 % | 26443915 | 49.98 % | 26213312 | 49.54 % |
| Bisulfite_reads G2A | 48939978 | 46.25 % | 24586080 | 46.47 % | 24353898 | 46.03 % |
| Concept | Value |
|---|---|
| Unique Fragments | 38118651 |
| Average Unique | 72.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2927436707 | 35.93 % | 1122891343 | 27.56 % | 1804545364 | 44.29 % |
| Base Counts Overall C | 1121584628 | 13.77 % | 139196419 | 3.42 % | 982388209 | 24.11 % |
| Base Counts Overall G | 1153699235 | 14.16 % | 991902719 | 24.35 % | 161796516 | 3.97 % |
| Base Counts Overall T | 2839152528 | 34.85 % | 1767003735 | 43.37 % | 1072148793 | 26.32 % |
| Base Counts Overall N | 106070090 | 1.30 % | 52977378 | 1.30 % | 53092712 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 47117875 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 52908722 |
| 76 | 52908722 |
| Insert Size Histogram |
|---|
 |