/EXTERNAL BLUEPRINT/K012134_1_lane_gembs/EXTERNAL-K012134_1895076_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 85911034 | 100.00 % | 42955517 | 100.00 % | 42955517 | 100.00 % |
| General Reads | 76278368 | 88.79 % | 38310757 | 89.19 % | 37967611 | 88.39 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9632666 | 11.21 % | 4644760 | 10.81 % | 4987906 | 11.61 % |
| Bisulfite_reads C2T | 39460395 | 45.93 % | 19814114 | 46.13 % | 19646281 | 45.74 % |
| Bisulfite_reads G2A | 36817973 | 42.86 % | 18496643 | 43.06 % | 18321330 | 42.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 28177440 |
| Average Unique | 65.60 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2291161168 | 34.64 % | 884664891 | 26.75 % | 1406496277 | 42.52 % |
| Base Counts Overall C | 977629293 | 14.78 % | 168440598 | 5.09 % | 809188695 | 24.46 % |
| Base Counts Overall G | 1003570707 | 15.17 % | 812421207 | 24.56 % | 191149500 | 5.78 % |
| Base Counts Overall T | 2255472209 | 34.10 % | 1398223003 | 42.27 % | 857249206 | 25.92 % |
| Base Counts Overall N | 87316241 | 1.32 % | 43825110 | 1.32 % | 43491131 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 34950313 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 42955517 |
| 76 | 42955517 |
| Insert Size Histogram |
|---|
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