{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 76382338, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 74189001, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.13, 
            "paired": 76382338, 
            "paired_qc_failed": 0, 
            "read1": 38191169, 
            "read1_qc_failed": 0, 
            "read2": 38191169, 
            "read2_qc_failed": 0, 
            "paired_properly": 72111678, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.41, 
            "with_itself": 73171537, 
            "with_itself_qc_failed": 0, 
            "singletons": 1017464, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.33, 
            "diff_chroms": 639955, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 148269018, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 143500908, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.78, 
            "paired": 148269018, 
            "paired_qc_failed": 0, 
            "read1": 74134509, 
            "read1_qc_failed": 0, 
            "read2": 74134509, 
            "read2_qc_failed": 0, 
            "paired_properly": 140225987, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.58, 
            "with_itself": 141622671, 
            "with_itself_qc_failed": 0, 
            "singletons": 1878237, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.27, 
            "diff_chroms": 652729, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 30792753, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 75931, 
            "paired_opt_dupes": 8229, 
            "dupes_pct": 0.002466
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 59090669, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 523701, 
            "paired_opt_dupes": 14446, 
            "dupes_pct": 0.008863
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30758935, 
            "distinct_read_pairs": 30683330, 
            "one_read_pair": 30607951, 
            "two_read_pair": 75159, 
            "NRF": 0.997542, 
            "PBC1": 0.997543, 
            "PBC2": 407.242659
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57674075, 
            "distinct_read_pairs": 57472830, 
            "one_read_pair": 57272993, 
            "two_read_pair": 198503, 
            "NRF": 0.996511, 
            "PBC1": 0.996523, 
            "PBC2": 288.524571
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 61433644, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61433644, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 61433644, 
            "paired_qc_failed": 0, 
            "read1": 30716822, 
            "read1_qc_failed": 0, 
            "read2": 30716822, 
            "read2_qc_failed": 0, 
            "paired_properly": 61433644, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 61433644, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 117133936, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117133936, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 117133936, 
            "paired_qc_failed": 0, 
            "read1": 58566968, 
            "read1_qc_failed": 0, 
            "read2": 58566968, 
            "read2_qc_failed": 0, 
            "paired_properly": 117133936, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 117133936, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 73766, 
        "Np": 0, 
        "N_opt": 73766, 
        "N_consv": 73766, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.186156713102402, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2022317, 
            "argmin_corr": 1500, 
            "min_corr": 0.1781832, 
            "NSC": 1.044749, 
            "RSC": 0.3315597
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.176922371203
        }, 
        "rep1-pr1": {
            "FRiP": 0.173118530485
        }, 
        "rep1-pr2": {
            "FRiP": 0.173349959082
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.10454197768
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273127388308, 
            "auc": 0.494792457423, 
            "ch_div": 0.120569942282, 
            "elbow_pt": 0.0, 
            "jsd": 0.577787285257, 
            "syn_auc": 0.505718415654, 
            "syn_elbow_pt": 0.166624177365, 
            "syn_jsd": 0.286110350652
        }
    ]
}