{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 87232468, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80962264, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.81, 
            "paired": 87232468, 
            "paired_qc_failed": 0, 
            "read1": 43616234, 
            "read1_qc_failed": 0, 
            "read2": 43616234, 
            "read2_qc_failed": 0, 
            "paired_properly": 80428697, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.2, 
            "with_itself": 80689661, 
            "with_itself_qc_failed": 0, 
            "singletons": 272603, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.31, 
            "diff_chroms": 85267, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 148269018, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 143500908, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.78, 
            "paired": 148269018, 
            "paired_qc_failed": 0, 
            "read1": 74134509, 
            "read1_qc_failed": 0, 
            "read2": 74134509, 
            "read2_qc_failed": 0, 
            "paired_properly": 140225987, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.58, 
            "with_itself": 141622671, 
            "with_itself_qc_failed": 0, 
            "singletons": 1878237, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.27, 
            "diff_chroms": 652729, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36222508, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1463171, 
            "paired_opt_dupes": 19822, 
            "dupes_pct": 0.040394
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 59090669, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 523701, 
            "paired_opt_dupes": 14446, 
            "dupes_pct": 0.008863
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36039479, 
            "distinct_read_pairs": 34591321, 
            "one_read_pair": 33195848, 
            "two_read_pair": 1344552, 
            "NRF": 0.959817, 
            "PBC1": 0.959658, 
            "PBC2": 24.689151
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57674075, 
            "distinct_read_pairs": 57472830, 
            "one_read_pair": 57272993, 
            "two_read_pair": 198503, 
            "NRF": 0.996511, 
            "PBC1": 0.996523, 
            "PBC2": 288.524571
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 69518674, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 69518674, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 69518674, 
            "paired_qc_failed": 0, 
            "read1": 34759337, 
            "read1_qc_failed": 0, 
            "read2": 34759337, 
            "read2_qc_failed": 0, 
            "paired_properly": 69518674, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 69518674, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 117133936, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117133936, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 117133936, 
            "paired_qc_failed": 0, 
            "read1": 58566968, 
            "read1_qc_failed": 0, 
            "read2": 58566968, 
            "read2_qc_failed": 0, 
            "paired_properly": 117133936, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 117133936, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 80596, 
        "Np": 0, 
        "N_opt": 80596, 
        "N_consv": 80596, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.193977587362062, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1995477, 
            "argmin_corr": 1500, 
            "min_corr": 0.1799725, 
            "NSC": 1.077818, 
            "RSC": 0.7154503
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.335189222753
        }, 
        "rep1-pr1": {
            "FRiP": 0.317375785753
        }, 
        "rep1-pr2": {
            "FRiP": 0.317619131042
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.296814452388
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.225741361524, 
            "auc": 0.495115730545, 
            "ch_div": 0.112255118545, 
            "elbow_pt": 0.0, 
            "jsd": 0.716514291541, 
            "syn_auc": 0.498510501655, 
            "syn_elbow_pt": 0.268125163706, 
            "syn_jsd": 0.380769116157
        }
    ]
}