{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 132508434, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 128148801, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.71, 
            "paired": 132508434, 
            "paired_qc_failed": 0, 
            "read1": 66254217, 
            "read1_qc_failed": 0, 
            "read2": 66254217, 
            "read2_qc_failed": 0, 
            "paired_properly": 126482526, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.45, 
            "with_itself": 127303456, 
            "with_itself_qc_failed": 0, 
            "singletons": 845345, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.64, 
            "diff_chroms": 350643, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 334658014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 328702336, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 334658014, 
            "paired_qc_failed": 0, 
            "read1": 167329007, 
            "read1_qc_failed": 0, 
            "read2": 167329007, 
            "read2_qc_failed": 0, 
            "paired_properly": 320102484, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.65, 
            "with_itself": 326658529, 
            "with_itself_qc_failed": 0, 
            "singletons": 2043807, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.61, 
            "diff_chroms": 620372, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 55319924, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1030278, 
            "paired_opt_dupes": 9090, 
            "dupes_pct": 0.018624
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 141663705, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1830718, 
            "paired_opt_dupes": 10233, 
            "dupes_pct": 0.012923
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 55215470, 
            "distinct_read_pairs": 54188783, 
            "one_read_pair": 53177862, 
            "two_read_pair": 995378, 
            "NRF": 0.981406, 
            "PBC1": 0.981344, 
            "PBC2": 53.424791
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 141095473, 
            "distinct_read_pairs": 139340732, 
            "one_read_pair": 137631421, 
            "two_read_pair": 1682298, 
            "NRF": 0.987563, 
            "PBC1": 0.987733, 
            "PBC2": 81.811558
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 108579292, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108579292, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 108579292, 
            "paired_qc_failed": 0, 
            "read1": 54289646, 
            "read1_qc_failed": 0, 
            "read2": 54289646, 
            "read2_qc_failed": 0, 
            "paired_properly": 108579292, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 108579292, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 279665974, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 279665974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 279665974, 
            "paired_qc_failed": 0, 
            "read1": 139832987, 
            "read1_qc_failed": 0, 
            "read2": 139832987, 
            "read2_qc_failed": 0, 
            "paired_properly": 279665974, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 279665974, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 131530, 
        "Np": 0, 
        "N_opt": 131530, 
        "N_consv": 131530, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 120, 
            "corr_est_frag_len": 0.18447410288235, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1986653, 
            "argmin_corr": 1500, 
            "min_corr": 0.1768363, 
            "NSC": 1.043191, 
            "RSC": 0.3498922
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.203908546904
        }, 
        "rep1-pr1": {
            "FRiP": 0.188532132406
        }, 
        "rep1-pr2": {
            "FRiP": 0.188254886408
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.111088645412
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.286782233705, 
            "auc": 0.496085523798, 
            "ch_div": 0.104217975372, 
            "elbow_pt": 0.0, 
            "jsd": 0.554223972493, 
            "syn_auc": 0.498051254294, 
            "syn_elbow_pt": 0.162005139441, 
            "syn_jsd": 0.27579121249
        }
    ]
}