{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 147325006, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 144798060, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.28, 
            "paired": 147325006, 
            "paired_qc_failed": 0, 
            "read1": 73662503, 
            "read1_qc_failed": 0, 
            "read2": 73662503, 
            "read2_qc_failed": 0, 
            "paired_properly": 143152775, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.17, 
            "with_itself": 143723153, 
            "with_itself_qc_failed": 0, 
            "singletons": 1074907, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.73, 
            "diff_chroms": 280912, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 193594802, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 187969057, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.09, 
            "paired": 193594802, 
            "paired_qc_failed": 0, 
            "read1": 96797401, 
            "read1_qc_failed": 0, 
            "read2": 96797401, 
            "read2_qc_failed": 0, 
            "paired_properly": 184287983, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.19, 
            "with_itself": 185784698, 
            "with_itself_qc_failed": 0, 
            "singletons": 2184359, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.13, 
            "diff_chroms": 610670, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 63006984, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1517193, 
            "paired_opt_dupes": 19081, 
            "dupes_pct": 0.02408
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78211821, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 539110, 
            "paired_opt_dupes": 19807, 
            "dupes_pct": 0.006893
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 62894878, 
            "distinct_read_pairs": 61382500, 
            "one_read_pair": 59902602, 
            "two_read_pair": 1448123, 
            "NRF": 0.975954, 
            "PBC1": 0.975891, 
            "PBC2": 41.365686
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 77646644, 
            "distinct_read_pairs": 77172156, 
            "one_read_pair": 76701136, 
            "two_read_pair": 467668, 
            "NRF": 0.993889, 
            "PBC1": 0.993897, 
            "PBC2": 164.007664
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 122979582, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122979582, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 122979582, 
            "paired_qc_failed": 0, 
            "read1": 61489791, 
            "read1_qc_failed": 0, 
            "read2": 61489791, 
            "read2_qc_failed": 0, 
            "paired_properly": 122979582, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 122979582, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 155345422, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 155345422, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 155345422, 
            "paired_qc_failed": 0, 
            "read1": 77672711, 
            "read1_qc_failed": 0, 
            "read2": 77672711, 
            "read2_qc_failed": 0, 
            "paired_properly": 155345422, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 155345422, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 158927, 
        "Np": 0, 
        "N_opt": 158927, 
        "N_consv": 158927, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.198162677132464, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1992464, 
            "argmin_corr": 1500, 
            "min_corr": 0.1808685, 
            "NSC": 1.095617, 
            "RSC": 0.9410329
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.381875233169
        }, 
        "rep1-pr1": {
            "FRiP": 0.359405661223
        }, 
        "rep1-pr2": {
            "FRiP": 0.359453231784
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.331795348837
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.221939109374, 
            "auc": 0.496330708621, 
            "ch_div": 0.103005621796, 
            "elbow_pt": 0.0, 
            "jsd": 0.709873729498, 
            "syn_auc": 0.501318190589, 
            "syn_elbow_pt": 0.280537473612, 
            "syn_jsd": 0.390471949522
        }
    ]
}