{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 106544834, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 104745511, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 106544834, 
            "paired_qc_failed": 0, 
            "read1": 53272417, 
            "read1_qc_failed": 0, 
            "read2": 53272417, 
            "read2_qc_failed": 0, 
            "paired_properly": 104037859, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.65, 
            "with_itself": 104414286, 
            "with_itself_qc_failed": 0, 
            "singletons": 331225, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.31, 
            "diff_chroms": 168963, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 193594802, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 187969057, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.09, 
            "paired": 193594802, 
            "paired_qc_failed": 0, 
            "read1": 96797401, 
            "read1_qc_failed": 0, 
            "read2": 96797401, 
            "read2_qc_failed": 0, 
            "paired_properly": 184287983, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.19, 
            "with_itself": 185784698, 
            "with_itself_qc_failed": 0, 
            "singletons": 2184359, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.13, 
            "diff_chroms": 610670, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 47646019, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3053913, 
            "paired_opt_dupes": 4579, 
            "dupes_pct": 0.064096
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78211821, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 539110, 
            "paired_opt_dupes": 19807, 
            "dupes_pct": 0.006893
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 47620951, 
            "distinct_read_pairs": 44568740, 
            "one_read_pair": 41683528, 
            "two_read_pair": 2726536, 
            "NRF": 0.935906, 
            "PBC1": 0.935264, 
            "PBC2": 15.28809
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 77646644, 
            "distinct_read_pairs": 77172156, 
            "one_read_pair": 76701136, 
            "two_read_pair": 467668, 
            "NRF": 0.993889, 
            "PBC1": 0.993897, 
            "PBC2": 164.007664
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 89184212, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 89184212, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 89184212, 
            "paired_qc_failed": 0, 
            "read1": 44592106, 
            "read1_qc_failed": 0, 
            "read2": 44592106, 
            "read2_qc_failed": 0, 
            "paired_properly": 89184212, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 89184212, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 155345422, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 155345422, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 155345422, 
            "paired_qc_failed": 0, 
            "read1": 77672711, 
            "read1_qc_failed": 0, 
            "read2": 77672711, 
            "read2_qc_failed": 0, 
            "paired_properly": 155345422, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 155345422, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 132482, 
        "Np": 0, 
        "N_opt": 132482, 
        "N_consv": 132482, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.213152673126922, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2055937, 
            "argmin_corr": 1500, 
            "min_corr": 0.1864281, 
            "NSC": 1.143351, 
            "RSC": 1.394402
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.453308328813
        }, 
        "rep1-pr1": {
            "FRiP": 0.435518799252
        }, 
        "rep1-pr2": {
            "FRiP": 0.435784834842
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.410758013111
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.184601202147, 
            "auc": 0.495673992612, 
            "ch_div": 0.13239010308, 
            "elbow_pt": 0.0, 
            "jsd": 0.756591416165, 
            "syn_auc": 0.505406724138, 
            "syn_elbow_pt": 0.349466757626, 
            "syn_jsd": 0.446722042359
        }
    ]
}